Source code for autogluon.tabular.models.tabicl.tabicl_model

"""
Code Adapted from TabArena: https://github.com/autogluon/tabarena/blob/main/tabarena/tabarena/benchmark/models/ag/tabicl/tabicl_model.py
"""

from __future__ import annotations

import logging

import numpy as np
import pandas as pd

from autogluon.common.utils.pandas_utils import get_approximate_df_mem_usage
from autogluon.tabular import __version__
from autogluon.tabular.models.abstract.abstract_torch_model import AbstractTorchModel

logger = logging.getLogger(__name__)


# TODO: Verify if crashes when weights are not yet downloaded and fit in parallel
[docs] class TabICLModel(AbstractTorchModel): """ TabICL is a foundation model for tabular data using in-context learning that is scalable to larger datasets than TabPFNv2. It is pretrained purely on synthetic data. The default TabICL version used is TabICLv2. TabICL is one of the top performing methods overall on TabArena-v0.1: https://tabarena.ai TabICLv2 significantly improves upon TabICLv1, and achieves very strong performance on TabArena. Paper: TabICL: A Tabular Foundation Model for In-Context Learning on Large Data Authors: Jingang Qu, David Holzmüller, Gaël Varoquaux, Marine Le Morvan Paper: TabICLv2: A better, faster, scalable, and open tabular foundation model Authors: Jingang Qu, David Holzmüller, Gaël Varoquaux, Marine Le Morvan Codebase: https://github.com/soda-inria/tabicl License: BSD-3-Clause .. versionadded:: 1.4.0 """ gpu_strongly_recommended: bool = True # in-context inference is 12-63x slower on CPU ag_key = "TABICL" ag_name = "TabICL" default_classification_model: str | None = "tabicl-classifier-v2-20260212.ckpt" default_regression_model: str | None = "tabicl-regressor-v2-20260212.ckpt" ag_priority = 65 seed_name = "random_state" _supported_problem_types = ["binary", "multiclass", "regression", "quantile"] _default_auxiliary_params_extra = { # TODO: Instead of caps, should we subsample for large datasets? # Measured peak VRAM is already ~83 GB at 100k rows x 100 features, so a 1M-row fit is far # outside what a single GPU serves; 500k keeps the cap within reach of a large card. "max_rows": 500000, "max_features": 2000, # TODO: What should be the cap? 10k features works, but unsure if it is good # No prediction chunking: tabicl batches internally (VRAM-adaptive with # OOM-halving), and each external chunk would re-encode the full training # context (kv_cache is off by default) — a 1024-row cap made a 100k-row # predict ~100x slower while saving no VRAM. "max_batch_size": None, } _default_ag_args_ensemble_extra = { "fold_fitting_strategy": "sequential_local", "refit_folds": True, # Better to refit the model for faster inference and similar quality as the bag. } """Set fold_fitting_strategy to sequential_local, as parallel folding crashes if model weights aren't pre-downloaded.""" default_resources_physical_cores_only = True default_num_gpus = 1 def get_model_cls(self): if self.problem_type in ["binary", "multiclass"]: from tabicl import TabICLClassifier model_cls = TabICLClassifier else: from tabicl import TabICLRegressor model_cls = TabICLRegressor return model_cls @staticmethod def _get_batch_size(n_cells: int): """Datasets-per-batch for tabicl's internal batching, by table size in cells. tabicl halves the batch on OOM, so these are starting points rather than hard limits; the tiers exist to avoid paying for a failed attempt first. The smallest tier matters because the column-embedding output, shape ``(batch_size, n_rows, n_columns, embed_dim)``, is tabicl's dominant allocation, so on the largest tables even 2 is too many. """ if n_cells <= 4_000_000: return 8 if n_cells <= 6_000_000: return 4 if n_cells <= 500_000_000: return 2 return 1 def get_checkpoint_version(self, hyperparameter: dict) -> str: clf_checkpoint = self.default_classification_model reg_checkpoint = self.default_regression_model # Resolve HPO if "checkpoint_version" in hyperparameter: if isinstance(hyperparameter["checkpoint_version"], str): clf_checkpoint = hyperparameter["checkpoint_version"] reg_checkpoint = hyperparameter["checkpoint_version"] elif isinstance(hyperparameter["checkpoint_version"], tuple): clf_checkpoint = hyperparameter["checkpoint_version"][0] reg_checkpoint = hyperparameter["checkpoint_version"][1] else: raise ValueError( "checkpoint_version hyperparameter must be either a string or a tuple of two strings (clf, reg)." ) if self.problem_type in ["binary", "multiclass"]: return clf_checkpoint return reg_checkpoint def _preprocess(self, X: pd.DataFrame, is_train: bool = False, **kwargs) -> pd.DataFrame: """Cast `category` columns that are entirely missing in a prediction batch to object dtype. Temporary workaround for https://github.com/soda-inria/tabicl/issues/143 (tabicl<=2.1.1): tabicl masks features that are all-NaN in the batch and fills them with the float 0.0, which poisons a `category` column, and its fitted `OrdinalEncoder` then crashes (`TypeError: ufunc 'isnan' not supported`). Happens whenever a categorical column is entirely missing within one prediction batch, e.g. an out-of-fold validation split during bagging. As an object column the same fill is dtype-legal and the 0.0 values go down the encoder's unknown-value path, which is the behavior tabicl's masking intends. The columns are all-NaN, so the cast loses nothing. Remove once the pinned tabicl carries the upstream fix. """ X = super()._preprocess(X, **kwargs) if not is_train: all_nan_categoricals = [ col for col, dtype in X.dtypes.items() if isinstance(dtype, pd.CategoricalDtype) and X[col].isna().all() ] if all_nan_categoricals: X = X.copy(deep=False) for col in all_nan_categoricals: X[col] = pd.Series(np.nan, index=X.index, dtype=object) return X def _fit( self, X: pd.DataFrame, y: pd.Series, num_cpus: int = 1, num_gpus: int = 0, **kwargs, ): try: import tabicl except ImportError as err: logger.log( 40, f"\tFailed to import tabicl! To use the TabICL model, " f"do: `pip install autogluon.tabular[tabicl]=={__version__}`.", ) raise err device = self._resolve_fit_device(num_gpus=num_gpus) model_cls = self.get_model_cls() hyp = self._get_model_params() hyp["batch_size"] = hyp.get("batch_size", self._get_batch_size(X.shape[0] * X.shape[1])) # Pin the checkpoint rather than inheriting whatever the installed tabicl defaults to, and # resolve the per-problem-type form of the `checkpoint_version` hyperparameter (a bare # string, or a `(classification, regression)` tuple) that the library itself does not accept. hyp["checkpoint_version"] = self.get_checkpoint_version(hyperparameter=hyp) self.model = model_cls( **hyp, device=device, n_jobs=num_cpus, ) X = self.preprocess(X, y=y, is_train=True) self.model = self.model.fit( X=X, y=y, ) def _predict_proba(self, X, **kwargs) -> np.ndarray: if self.problem_type == "quantile": X = self.preprocess(X, **kwargs) return np.asarray(self.model.predict(X, output_type="quantiles", alphas=self.quantile_levels)) return super()._predict_proba(X=X, **kwargs) def get_device(self) -> str: return self.model.device_.type # TODO: Better to have an official TabICL method for this def _set_device(self, device: str): device = self.to_torch_device(device) self.model.device_ = device self.model.device = self.model.device_.type self.model.model_ = self.model.model_.to(self.model.device_) self.model.inference_config_.COL_CONFIG.device = self.model.device_ self.model.inference_config_.ROW_CONFIG.device = self.model.device_ self.model.inference_config_.ICL_CONFIG.device = self.model.device_ @classmethod def _estimate_memory_usage_static( cls, *, X: pd.DataFrame, hyperparameters: dict = None, **kwargs, ) -> int: """ Heuristic memory estimate that is very primitive. Can be vastly improved. """ if hyperparameters is None: hyperparameters = {} dataset_size_mem_est = 3 * get_approximate_df_mem_usage(X).sum() # roughly 3x DataFrame memory size baseline_overhead_mem_est = 1e9 # 1 GB generic overhead n_rows = X.shape[0] n_features = X.shape[1] batch_size = hyperparameters.get("batch_size", cls._get_batch_size(X.shape[0] * X.shape[1])) embedding_dim = 128 bytes_per_float = 4 model_mem_estimate = 2 * batch_size * embedding_dim * bytes_per_float * (4 + n_rows) * n_features model_mem_estimate *= 1.3 # add 30% buffer # FIXME: Likely this is overly conservative now, figure out more accurate memory estimate for TabICLv2 # Early testing shows that cutting this in half is safe. # TODO: Observed memory spikes above expected values on large datasets, increasing mem estimate to compensate model_mem_estimate *= 2.0 # Note: 1.5 is not large enough, still gets OOM mem_estimate = model_mem_estimate + dataset_size_mem_est + baseline_overhead_mem_est return mem_estimate @classmethod def _estimate_gpu_memory_usage_static( cls, *, X: pd.DataFrame, hyperparameters: dict = None, **kwargs, ) -> int: """Minimum VRAM required across fit and prediction — NOT expected usage. tabicl plans its internal batches from free device memory, so its usage is opportunistic: the same task that reserves ~30 GB on an idle large GPU completes in under 1.5 GB of free VRAM at ~2x the runtime. Estimating usage instead of requirement would needlessly skip the model on busy/small devices. Requirement floors measured on synthetic fit+predict tasks: ~1 GB at 2M total cells (train + prediction rows x features), ~5 GB at 20M. The prediction-row count is unknown at fit time; assume at least 100k. Caveat: the plan is made from free memory at fit/predict start — VRAM claimed by other processes afterwards can still cause a hard OOM. """ n_train, n_features = X.shape n_test = max(100_000, n_train) total_cells = (n_train + n_test) * n_features return int(0.7e9 + 250 * total_cells) def _more_tags(self) -> dict: return {"can_refit_full": True}